Mapping hands-on

A step-by-step tutorial on aligning reads to a reference genome, examining BAM file contents, and exploring results in a genome browser. *For each of the sections covered in this course, please visit and follow along with the linked training materials. Additionally, you will find below a link to the history pad used during the live version of this course. Feel free to refer to it for exercises and Q&A, which might improve your learning experience.*[slides][{"0":"00:00:00.000","1":"00:01:54.160","2":"696cf3ece4b0e8ba829f9dec","3":"0.0","isRemoved":false},{"0":"00:01:54.160","1":"00:02:32.120","2":"696cf3ece4b0e8ba829f9dee","3":"114.16000000000001","isRemoved":false},{"0":"00:02:32.120","1":"00:03:22.240","2":"696cf3ece4b0e8ba829f9df0","3":"152.12","isRemoved":false},{"0":"00:03:22.240","1":"00:03:43.920","2":"696cf3ece4b0e8ba829f9df2","3":"202.24","isRemoved":false},{"0":"00:03:43.920","1":"00:07:35.960","2":"696cf3ece4b0e8ba829f9df4","3":"223.92000000000002","isRemoved":false},{"0":"00:07:35.960","1":"00:08:41.160","2":"696cf3ece4b0e8ba829f9dfc","3":"455.96000000000004","isRemoved":false},{"0":"00:08:41.160","1":"00:09:04.960","2":"696cf3ece4b0e8ba829f9dfe","3":"521.1600000000001","isRemoved":false},{"0":"00:09:04.960","1":"00:09:38.240","2":"696cf3ece4b0e8ba829f9e00","3":"544.96","isRemoved":false},{"0":"00:09:38.240","1":"00:10:04.840","2":"696cf3ece4b0e8ba829f9e02","3":"578.24","isRemoved":false},{"0":"00:10:04.840","1":"00:10:35.640","2":"696cf3ece4b0e8ba829f9e04","3":"604.84","isRemoved":false},{"0":"00:10:35.640","1":"00:11:08.680","2":"696cf3ece4b0e8ba829f9e06","3":"635.6400000000001","isRemoved":false},{"0":"00:11:08.680","1":"00:14:56.320","2":"696cf3ece4b0e8ba829f9e08","3":"668.6800000000001","isRemoved":false},{"0":"00:14:56.320","1":"00:15:31.840","2":"696cf3ede4b0e8ba829f9e0a","3":"896.32","isRemoved":false},{"0":"00:15:31.840","1":"00:18:08.040","2":"696cf3ede4b0e8ba829f9e0c","3":"931.84","isRemoved":false},{"0":"00:18:08.040","1":"00:18:39.280","2":"696cf3ede4b0e8ba829f9e0e","3":"1088.0400000000002","isRemoved":false},{"0":"00:18:39.280","1":"00:19:09.280","2":"696cf3ede4b0e8ba829f9e10","3":"1119.2800000000002","isRemoved":false},{"0":"00:19:09.280","1":"00:19:47.280","2":"696cf3ede4b0e8ba829f9e12","3":"1149.2800000000002","isRemoved":false},{"0":"00:19:47.280","1":"00:20:18.200","2":"696cf3ede4b0e8ba829f9e14","3":"1187.2800000000002","isRemoved":false},{"0":"00:20:18.200","1":"00:20:40.680","2":"696cf3ede4b0e8ba829f9e16","3":"1218.2","isRemoved":false},{"0":"00:20:40.680","1":"00:22:05.120","2":"696cf3ede4b0e8ba829f9e18","3":"1240.68","isRemoved":false},{"0":"00:22:05.120","1":"00:22:45.280","2":"696cf3ede4b0e8ba829f9e1a","3":"1325.1200000000003","isRemoved":false},{"0":"00:22:45.280","1":"00:24:02.560","2":"696cf3ede4b0e8ba829f9e1c","3":"1365.2800000000002","isRemoved":false},{"0":"00:24:02.560","1":"00:24:37.480","2":"696cf3ede4b0e8ba829f9e1e","3":"1442.5600000000002","isRemoved":false},{"0":"00:24:37.480","1":"00:27:02.720","2":"696cf3ede4b0e8ba829f9e20","3":"1477.48","isRemoved":false},{"0":"00:27:02.720","1":"00:27:27.000","2":"696cf3ede4b0e8ba829f9e22","3":"1622.72","isRemoved":false},{"0":"00:27:27.000","1":"00:27:56.640","2":"696cf3ede4b0e8ba829f9e24","3":"1647.0000000000002","isRemoved":false},{"0":"00:27:56.640","1":"00:28:37.720","2":"696cf3ede4b0e8ba829f9e26","3":"1676.64","isRemoved":false},{"0":"00:28:37.720","1":"00:29:07.120","2":"696cf3ede4b0e8ba829f9e28","3":"1717.72","isRemoved":false},{"0":"00:29:07.120","1":"00:29:42.720","2":"696cf3ede4b0e8ba829f9e2a","3":"1747.1200000000003","isRemoved":false},{"0":"00:29:42.720","1":"00:30:11.400","2":"696cf3ede4b0e8ba829f9e2c","3":"1782.7200000000003","isRemoved":false},{"0":"00:30:11.400","1":"00:31:28.920","2":"696cf3ede4b0e8ba829f9e2e","3":"1811.4","isRemoved":false},{"0":"00:31:28.920","1":"00:32:25.240","2":"696cf3ede4b0e8ba829f9e30","3":"1888.92","isRemoved":false},{"0":"00:32:25.240","1":"00:33:09.160","2":"696cf3ede4b0e8ba829f9e32","3":"1945.2400000000002","isRemoved":false},{"0":"00:33:09.160","1":"00:33:38.720","2":"696cf3ede4b0e8ba829f9e50","3":"1989.16","isRemoved":false},{"0":"00:33:38.720","1":"00:34:04.200","2":"696cf3ede4b0e8ba829f9e52","3":"2018.7200000000003","isRemoved":false},{"0":"00:34:04.200","1":"00:34:57.960","2":"696cf3ede4b0e8ba829f9e54","3":"2044.2000000000003","isRemoved":false},{"0":"00:34:57.960","1":"00:35:29.920","2":"696cf3ede4b0e8ba829f9e56","3":"2097.96","isRemoved":false},{"0":"00:35:29.920","1":"00:36:36.480","2":"696cf3ede4b0e8ba829f9e58","3":"2129.92","isRemoved":false},{"0":"00:36:36.480","1":"00:36:57.240","2":"696cf3ede4b0e8ba829f9e5a","3":"2196.48","isRemoved":false}][endslides]